PoplarRustV1, Main, Exploration, bibRecord, 000055

Association analysis identifies Melampsora ×columbiana poplar leaf rust resistance SNPs.

Identifieur interne : 000055 ( Main/Exploration ); précédent : 000054; suivant : 000056

Association analysis identifies Melampsora ×columbiana poplar leaf rust resistance SNPs.

Auteurs : Jonathan La Mantia [Canada] ; Jaroslav Klápšt ; Yousry A. El-Kassaby ; Shofiul Azam ; Robert D. Guy ; Carl J. Douglas ; Shawn D. Mansfield ; Richard Hamelin

Source :

PloS one [ 1932-6203 ] ; 2013.

RBID : pubmed:24236018

Descripteurs français

English descriptors

KwdEn :
- Basidiomycota (MeSH), Disease Resistance (genetics), Gene Expression Regulation, Plant (MeSH), Genes, Plant (MeSH), Genetic Association Studies (MeSH), Linkage Disequilibrium (MeSH), Plant Diseases (genetics), Plant Diseases (microbiology), Plant Leaves (genetics), Plant Leaves (microbiology), Polymorphism, Single Nucleotide (MeSH), Populus (genetics), Populus (immunology), Populus (microbiology), Principal Component Analysis (MeSH).
MESH :
- genetics : Disease Resistance, Plant Diseases, Plant Leaves, Populus.
- immunology : Populus.
- microbiology : Plant Diseases, Plant Leaves, Populus.
- Basidiomycota, Gene Expression Regulation, Plant, Genes, Plant, Genetic Association Studies, Linkage Disequilibrium, Polymorphism, Single Nucleotide, Principal Component Analysis.

Abstract

Populus species are currently being domesticated through intensive time- and resource-dependent programs for utilization in phytoremediation, wood and paper products, and conversion to biofuels. Poplar leaf rust disease can greatly reduce wood volume. Genetic resistance is effective in reducing economic losses but major resistance loci have been race-specific and can be readily defeated by the pathogen. Developing durable disease resistance requires the identification of non-race-specific loci. In the presented study, area under the disease progress curve was calculated from natural infection of Melampsora ×columbiana in three consecutive years. Association analysis was performed using 412 P. trichocarpa clones genotyped with 29,355 SNPs covering 3,543 genes. We found 40 SNPs within 26 unique genes significantly associated (permutated P<0.05) with poplar rust severity. Moreover, two SNPs were repeated in all three years suggesting non-race-specificity and three additional SNPs were differentially expressed in other poplar rust interactions. These five SNPs were found in genes that have orthologs in Arabidopsis with functionality in pathogen induced transcriptome reprogramming, Ca²⁺/calmodulin and salicylic acid signaling, and tolerance to reactive oxygen species. The additive effect of non-R gene functional variants may constitute high levels of durable poplar leaf rust resistance. Therefore, these findings are of significance for speeding the genetic improvement of this long-lived, economically important organism.

DOI: 10.1371/journal.pone.0078423
PubMed: 24236018
PubMed Central: PMC3827267

Affiliations:

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000049
to stream Main, to step Curation: 000049

Le document en format XML

<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Association analysis identifies Melampsora ×columbiana poplar leaf rust resistance SNPs.</title>
<author><name sortKey="La Mantia, Jonathan" sort="La Mantia, Jonathan" uniqKey="La Mantia J" first="Jonathan" last="La Mantia">Jonathan La Mantia</name>
<affiliation wicri:level="4"><nlm:affiliation>Department of Forest and Conservation Sciences, University of British Columbia, Vancouver, British Columbia, Canada.</nlm:affiliation>
<country xml:lang="fr">Canada</country>
<wicri:regionArea>Department of Forest and Conservation Sciences, University of British Columbia, Vancouver, British Columbia</wicri:regionArea>
<orgName type="university">Université de la Colombie-Britannique</orgName>
<placeName><settlement type="city">Vancouver</settlement>
<region type="state">Colombie-Britannique </region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Klapst, Jaroslav" sort="Klapst, Jaroslav" uniqKey="Klapst J" first="Jaroslav" last="Klápšt">Jaroslav Klápšt</name>
</author>
<author><name sortKey="El Kassaby, Yousry A" sort="El Kassaby, Yousry A" uniqKey="El Kassaby Y" first="Yousry A" last="El-Kassaby">Yousry A. El-Kassaby</name>
</author>
<author><name sortKey="Azam, Shofiul" sort="Azam, Shofiul" uniqKey="Azam S" first="Shofiul" last="Azam">Shofiul Azam</name>
</author>
<author><name sortKey="Guy, Robert D" sort="Guy, Robert D" uniqKey="Guy R" first="Robert D" last="Guy">Robert D. Guy</name>
</author>
<author><name sortKey="Douglas, Carl J" sort="Douglas, Carl J" uniqKey="Douglas C" first="Carl J" last="Douglas">Carl J. Douglas</name>
</author>
<author><name sortKey="Mansfield, Shawn D" sort="Mansfield, Shawn D" uniqKey="Mansfield S" first="Shawn D" last="Mansfield">Shawn D. Mansfield</name>
</author>
<author><name sortKey="Hamelin, Richard" sort="Hamelin, Richard" uniqKey="Hamelin R" first="Richard" last="Hamelin">Richard Hamelin</name>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2013">2013</date>
<idno type="RBID">pubmed:24236018</idno>
<idno type="pmid">24236018</idno>
<idno type="doi">10.1371/journal.pone.0078423</idno>
<idno type="pmc">PMC3827267</idno>
<idno type="wicri:Area/Main/Corpus">000049</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000049</idno>
<idno type="wicri:Area/Main/Curation">000049</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000049</idno>
<idno type="wicri:Area/Main/Exploration">000049</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">Association analysis identifies Melampsora ×columbiana poplar leaf rust resistance SNPs.</title>
<author><name sortKey="La Mantia, Jonathan" sort="La Mantia, Jonathan" uniqKey="La Mantia J" first="Jonathan" last="La Mantia">Jonathan La Mantia</name>
<affiliation wicri:level="4"><nlm:affiliation>Department of Forest and Conservation Sciences, University of British Columbia, Vancouver, British Columbia, Canada.</nlm:affiliation>
<country xml:lang="fr">Canada</country>
<wicri:regionArea>Department of Forest and Conservation Sciences, University of British Columbia, Vancouver, British Columbia</wicri:regionArea>
<orgName type="university">Université de la Colombie-Britannique</orgName>
<placeName><settlement type="city">Vancouver</settlement>
<region type="state">Colombie-Britannique </region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Klapst, Jaroslav" sort="Klapst, Jaroslav" uniqKey="Klapst J" first="Jaroslav" last="Klápšt">Jaroslav Klápšt</name>
</author>
<author><name sortKey="El Kassaby, Yousry A" sort="El Kassaby, Yousry A" uniqKey="El Kassaby Y" first="Yousry A" last="El-Kassaby">Yousry A. El-Kassaby</name>
</author>
<author><name sortKey="Azam, Shofiul" sort="Azam, Shofiul" uniqKey="Azam S" first="Shofiul" last="Azam">Shofiul Azam</name>
</author>
<author><name sortKey="Guy, Robert D" sort="Guy, Robert D" uniqKey="Guy R" first="Robert D" last="Guy">Robert D. Guy</name>
</author>
<author><name sortKey="Douglas, Carl J" sort="Douglas, Carl J" uniqKey="Douglas C" first="Carl J" last="Douglas">Carl J. Douglas</name>
</author>
<author><name sortKey="Mansfield, Shawn D" sort="Mansfield, Shawn D" uniqKey="Mansfield S" first="Shawn D" last="Mansfield">Shawn D. Mansfield</name>
</author>
<author><name sortKey="Hamelin, Richard" sort="Hamelin, Richard" uniqKey="Hamelin R" first="Richard" last="Hamelin">Richard Hamelin</name>
</author>
</analytic>
<series><title level="j">PloS one</title>
<idno type="eISSN">1932-6203</idno>
<imprint><date when="2013" type="published">2013</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Basidiomycota (MeSH)</term>
<term>Disease Resistance (genetics)</term>
<term>Gene Expression Regulation, Plant (MeSH)</term>
<term>Genes, Plant (MeSH)</term>
<term>Genetic Association Studies (MeSH)</term>
<term>Linkage Disequilibrium (MeSH)</term>
<term>Plant Diseases (genetics)</term>
<term>Plant Diseases (microbiology)</term>
<term>Plant Leaves (genetics)</term>
<term>Plant Leaves (microbiology)</term>
<term>Polymorphism, Single Nucleotide (MeSH)</term>
<term>Populus (genetics)</term>
<term>Populus (immunology)</term>
<term>Populus (microbiology)</term>
<term>Principal Component Analysis (MeSH)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Analyse en composantes principales (MeSH)</term>
<term>Basidiomycota (MeSH)</term>
<term>Déséquilibre de liaison (MeSH)</term>
<term>Feuilles de plante (génétique)</term>
<term>Feuilles de plante (microbiologie)</term>
<term>Gènes de plante (MeSH)</term>
<term>Maladies des plantes (génétique)</term>
<term>Maladies des plantes (microbiologie)</term>
<term>Polymorphisme de nucléotide simple (MeSH)</term>
<term>Populus (génétique)</term>
<term>Populus (immunologie)</term>
<term>Populus (microbiologie)</term>
<term>Régulation de l'expression des gènes végétaux (MeSH)</term>
<term>Résistance à la maladie (génétique)</term>
<term>Études d'associations génétiques (MeSH)</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Disease Resistance</term>
<term>Plant Diseases</term>
<term>Plant Leaves</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Feuilles de plante</term>
<term>Maladies des plantes</term>
<term>Populus</term>
<term>Résistance à la maladie</term>
</keywords>
<keywords scheme="MESH" qualifier="immunologie" xml:lang="fr"><term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="immunology" xml:lang="en"><term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Feuilles de plante</term>
<term>Maladies des plantes</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Diseases</term>
<term>Plant Leaves</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Basidiomycota</term>
<term>Gene Expression Regulation, Plant</term>
<term>Genes, Plant</term>
<term>Genetic Association Studies</term>
<term>Linkage Disequilibrium</term>
<term>Polymorphism, Single Nucleotide</term>
<term>Principal Component Analysis</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Analyse en composantes principales</term>
<term>Basidiomycota</term>
<term>Déséquilibre de liaison</term>
<term>Gènes de plante</term>
<term>Polymorphisme de nucléotide simple</term>
<term>Régulation de l'expression des gènes végétaux</term>
<term>Études d'associations génétiques</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">Populus species are currently being domesticated through intensive time- and resource-dependent programs for utilization in phytoremediation, wood and paper products, and conversion to biofuels. Poplar leaf rust disease can greatly reduce wood volume. Genetic resistance is effective in reducing economic losses but major resistance loci have been race-specific and can be readily defeated by the pathogen. Developing durable disease resistance requires the identification of non-race-specific loci. In the presented study, area under the disease progress curve was calculated from natural infection of Melampsora ×columbiana in three consecutive years. Association analysis was performed using 412 P. trichocarpa clones genotyped with 29,355 SNPs covering 3,543 genes. We found 40 SNPs within 26 unique genes significantly associated (permutated P<0.05) with poplar rust severity. Moreover, two SNPs were repeated in all three years suggesting non-race-specificity and three additional SNPs were differentially expressed in other poplar rust interactions. These five SNPs were found in genes that have orthologs in Arabidopsis with functionality in pathogen induced transcriptome reprogramming, Ca²⁺/calmodulin and salicylic acid signaling, and tolerance to reactive oxygen species. The additive effect of non-R gene functional variants may constitute high levels of durable poplar leaf rust resistance. Therefore, these findings are of significance for speeding the genetic improvement of this long-lived, economically important organism.</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">24236018</PMID>
<DateCompleted><Year>2014</Year>
<Month>09</Month>
<Day>02</Day>
</DateCompleted>
<DateRevised><Year>2018</Year>
<Month>11</Month>
<Day>13</Day>
</DateRevised>
<Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Electronic">1932-6203</ISSN>
<JournalIssue CitedMedium="Internet"><Volume>8</Volume>
<Issue>11</Issue>
<PubDate><Year>2013</Year>
</PubDate>
</JournalIssue>
<Title>PloS one</Title>
<ISOAbbreviation>PLoS One</ISOAbbreviation>
</Journal>
<ArticleTitle>Association analysis identifies Melampsora ×columbiana poplar leaf rust resistance SNPs.</ArticleTitle>
<Pagination><MedlinePgn>e78423</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1371/journal.pone.0078423</ELocationID>
<Abstract><AbstractText>Populus species are currently being domesticated through intensive time- and resource-dependent programs for utilization in phytoremediation, wood and paper products, and conversion to biofuels. Poplar leaf rust disease can greatly reduce wood volume. Genetic resistance is effective in reducing economic losses but major resistance loci have been race-specific and can be readily defeated by the pathogen. Developing durable disease resistance requires the identification of non-race-specific loci. In the presented study, area under the disease progress curve was calculated from natural infection of Melampsora ×columbiana in three consecutive years. Association analysis was performed using 412 P. trichocarpa clones genotyped with 29,355 SNPs covering 3,543 genes. We found 40 SNPs within 26 unique genes significantly associated (permutated P<0.05) with poplar rust severity. Moreover, two SNPs were repeated in all three years suggesting non-race-specificity and three additional SNPs were differentially expressed in other poplar rust interactions. These five SNPs were found in genes that have orthologs in Arabidopsis with functionality in pathogen induced transcriptome reprogramming, Ca²⁺/calmodulin and salicylic acid signaling, and tolerance to reactive oxygen species. The additive effect of non-R gene functional variants may constitute high levels of durable poplar leaf rust resistance. Therefore, these findings are of significance for speeding the genetic improvement of this long-lived, economically important organism.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>La Mantia</LastName>
<ForeName>Jonathan</ForeName>
<Initials>J</Initials>
<AffiliationInfo><Affiliation>Department of Forest and Conservation Sciences, University of British Columbia, Vancouver, British Columbia, Canada.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Klápště</LastName>
<ForeName>Jaroslav</ForeName>
<Initials>J</Initials>
</Author>
<Author ValidYN="Y"><LastName>El-Kassaby</LastName>
<ForeName>Yousry A</ForeName>
<Initials>YA</Initials>
</Author>
<Author ValidYN="Y"><LastName>Azam</LastName>
<ForeName>Shofiul</ForeName>
<Initials>S</Initials>
</Author>
<Author ValidYN="Y"><LastName>Guy</LastName>
<ForeName>Robert D</ForeName>
<Initials>RD</Initials>
</Author>
<Author ValidYN="Y"><LastName>Douglas</LastName>
<ForeName>Carl J</ForeName>
<Initials>CJ</Initials>
</Author>
<Author ValidYN="Y"><LastName>Mansfield</LastName>
<ForeName>Shawn D</ForeName>
<Initials>SD</Initials>
</Author>
<Author ValidYN="Y"><LastName>Hamelin</LastName>
<ForeName>Richard</ForeName>
<Initials>R</Initials>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic"><Year>2013</Year>
<Month>11</Month>
<Day>13</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo><Country>United States</Country>
<MedlineTA>PLoS One</MedlineTA>
<NlmUniqueID>101285081</NlmUniqueID>
<ISSNLinking>1932-6203</ISSNLinking>
</MedlineJournalInfo>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList><MeshHeading><DescriptorName UI="D001487" MajorTopicYN="Y">Basidiomycota</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D060467" MajorTopicYN="N">Disease Resistance</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018506" MajorTopicYN="N">Gene Expression Regulation, Plant</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D017343" MajorTopicYN="N">Genes, Plant</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D056726" MajorTopicYN="N">Genetic Association Studies</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D015810" MajorTopicYN="N">Linkage Disequilibrium</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D020641" MajorTopicYN="Y">Polymorphism, Single Nucleotide</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000276" MajorTopicYN="N">immunology</QualifierName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D025341" MajorTopicYN="N">Principal Component Analysis</DescriptorName>
</MeshHeading>
</MeshHeadingList>
</MedlineCitation>
<PubmedData><History><PubMedPubDate PubStatus="received"><Year>2013</Year>
<Month>05</Month>
<Day>09</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="accepted"><Year>2013</Year>
<Month>09</Month>
<Day>19</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez"><Year>2013</Year>
<Month>11</Month>
<Day>16</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="pubmed"><Year>2013</Year>
<Month>11</Month>
<Day>16</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline"><Year>2014</Year>
<Month>9</Month>
<Day>3</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>epublish</PublicationStatus>
<ArticleIdList><ArticleId IdType="pubmed">24236018</ArticleId>
<ArticleId IdType="doi">10.1371/journal.pone.0078423</ArticleId>
<ArticleId IdType="pii">PONE-D-13-19220</ArticleId>
<ArticleId IdType="pmc">PMC3827267</ArticleId>
</ArticleIdList>
<ReferenceList><Reference><Citation>Theor Appl Genet. 2004 Jun;109(1):10-22</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15085260</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS Genet. 2006 Dec;2(12):e190</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17194218</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Genet. 2006 Aug;38(8):904-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16862161</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2007 May;144(1):347-66</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17400708</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Theor Appl Genet. 2012 Feb;124(2):233-46</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21915710</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Ann Hum Genet. 2012 Nov;76(6):510-23</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22971009</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Genet. 2008 May;40(5):646-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18425127</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2010 Oct;188(2):515-32</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20831625</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Plant Microbe Interact. 2007 Aug;20(8):900-11</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17722694</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2007 Oct 1;23(19):2633-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17586829</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genomics. 2010 Mar;95(3):176-82</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20060464</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genet Epidemiol. 2009 Jul;33(5):432-41</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19140130</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genetics. 2007 Dec;177(4):2389-97</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18073436</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Phytopathology. 2001 Nov;91(11):1069-73</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18943442</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2012 Nov;196(3):713-25</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22861491</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell Physiol. 2005 May;46(5):686-98</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15767265</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genetics. 2008 Apr;178(4):2217-26</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18245834</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Hum Hered. 2008;65(2):77-84</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17898538</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Phytopathology. 2001 Oct;91(10):981-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18944125</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2012 Sep;71(6):907-20</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22540368</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Phytopathology. 2007 May;97(5):603-10</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18943580</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2011 Oct;192(1):151-63</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21658182</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Res. 2006 Feb;16(2):290-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16354752</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genetics. 2007 Nov;177(3):1889-913</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17947425</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2005 Jul;43(1):79-96</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15960618</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Phytopathology. 2006 Sep;96(9):1027-36</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18944059</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Sci. 2011 Oct;181(4):387-400</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21889044</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Genet. 2006 Feb;38(2):203-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16380716</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genetics. 2010 Oct;186(2):677-86</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20628037</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Phytopathology. 2003 Apr;93(4):421-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18944356</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS Genet. 2007 Jan 19;3(1):e4</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17238287</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Rev Genet. 2010 Jul;11(7):459-63</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20548291</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genetics. 2008 Mar;178(3):1745-54</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18245847</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Ecol Resour. 2013 Mar;13(2):306-23</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23311503</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2012 Feb;158(2):1054-66</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22158760</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
<affiliations><list><country><li>Canada</li>
</country>
<region><li>Colombie-Britannique </li>
</region>
<settlement><li>Vancouver</li>
</settlement>
<orgName><li>Université de la Colombie-Britannique</li>
</orgName>
</list>
<tree><noCountry><name sortKey="Azam, Shofiul" sort="Azam, Shofiul" uniqKey="Azam S" first="Shofiul" last="Azam">Shofiul Azam</name>
<name sortKey="Douglas, Carl J" sort="Douglas, Carl J" uniqKey="Douglas C" first="Carl J" last="Douglas">Carl J. Douglas</name>
<name sortKey="El Kassaby, Yousry A" sort="El Kassaby, Yousry A" uniqKey="El Kassaby Y" first="Yousry A" last="El-Kassaby">Yousry A. El-Kassaby</name>
<name sortKey="Guy, Robert D" sort="Guy, Robert D" uniqKey="Guy R" first="Robert D" last="Guy">Robert D. Guy</name>
<name sortKey="Hamelin, Richard" sort="Hamelin, Richard" uniqKey="Hamelin R" first="Richard" last="Hamelin">Richard Hamelin</name>
<name sortKey="Klapst, Jaroslav" sort="Klapst, Jaroslav" uniqKey="Klapst J" first="Jaroslav" last="Klápšt">Jaroslav Klápšt</name>
<name sortKey="Mansfield, Shawn D" sort="Mansfield, Shawn D" uniqKey="Mansfield S" first="Shawn D" last="Mansfield">Shawn D. Mansfield</name>
</noCountry>
<country name="Canada"><region name="Colombie-Britannique "><name sortKey="La Mantia, Jonathan" sort="La Mantia, Jonathan" uniqKey="La Mantia J" first="Jonathan" last="La Mantia">Jonathan La Mantia</name>
</region>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PoplarRustV1/Data/Main/Exploration

HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000055 | SxmlIndent | more

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000055 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Bois
   |area=    PoplarRustV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:24236018
   |texte=   Association analysis identifies Melampsora ×columbiana poplar leaf rust resistance SNPs.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:24236018" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a PoplarRustV1

This area was generated with Dilib version V0.6.37.
Data generation: Tue Oct 27 22:23:40 2020. Site generation: Sun Jan 31 22:19:43 2021

	Serveur d'exploration sur la rouille du peuplier
	Attention, ce site est en cours de développement ! Attention, site généré par des moyens informatiques à partir de corpus bruts. Les informations ne sont donc pas validées.

Serveur d'exploration sur la rouille du peuplier

Association analysis identifies Melampsora ×columbiana poplar leaf rust resistance SNPs.

Association analysis identifies Melampsora ×columbiana poplar leaf rust resistance SNPs.

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

Pour générer des pages wiki